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Course summary

Congratulations on completing the Scale with Seqera training course! 🎉

Your journey

You started by signing up for Seqera Platform and exploring the Community Showcase, then launched a production-scale pipeline, nf-core/rnaseq, from the web interface and monitored its execution. Next, you authenticated the tw CLI and learned to do everything from the terminal instead. Finally, you registered a new pipeline, nf-core/demo, from GitHub and launched it both from the web interface and the CLI.

What you learned

You are now able to launch and monitor Nextflow pipelines on Seqera Platform, whether you prefer the web interface or the command line.

  • A free Seqera account gives you a personal workspace and access to the Community Showcase.
  • Pipelines added to a workspace appear in the Launchpad and can be launched with a few clicks.
  • The tw CLI provides the same capabilities as the web interface, useful for scripting and automation.
  • Any GitHub-hosted pipeline with a main.nf and nextflow.config can be registered with tw pipelines add.
  • tw launch takes parameters through profiles and --params-file, rather than individual flags.

Skills acquired

Through this hands-on course, you've learned how to:

  • Sign up for Seqera Platform and explore the Community Showcase
  • Add a pipeline to a workspace and launch a run from the web interface
  • Monitor execution and inspect task-level details and reports
  • Authenticate and use the tw CLI to manage and launch pipelines from the terminal
  • Register a GitHub-hosted pipeline and launch it with a parameter file

You're now equipped to run and monitor your own pipelines on Seqera Platform, at scale.

Next steps to build your skills

Here are our top suggestions for what to do next:

Getting help

For help resources and community support, see the Help page.

Feedback survey

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